rs6064000 chr20:53794965 G>A
- Sequence
acatggtgtttccatgacacagga[G/A]aatcactgcaggagcacagatgat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFXL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFXL1_HUMAN | n/a | 3.74 | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, autism with high iq, birth weight, hdl cholesterol change with statins, irritible bowel syndrome, ldl cholesterol, tetrology of fallot, triglycerides change with statins