ADASTRA v5.1.3
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rs6064506
chr20:57168621
G
>
C
Sequence
atattgacgagcggccacttcccc[G/C]caaggcctggatgctaaacagagc
ASB in cell types
iPS-derived chondrocytes
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
iPS-derived chondrocytes
1.23
0.94
0.05
0.88
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
obesity with early age of onset (age >2)
,
systolic blood pressure (sbp)
GTEx eQTL
Brain_Cerebellum
,
Brain_Cortex
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale