rs6065299 chr20:41011928 C>A

Sequence
tcaaagaaaacagcagttaagaat[C/A]ataggcaatacaccatagggtgag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.25 0.89 0.031.00 1.25 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose college completion fasting blood glucose height systolic blood pressure (sbp) years of education
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Nucleus_accumbens_basal_ganglia Skin_Sun_Exposed_Lower_leg Thyroid

Download