rs6066104 chr20:46901891 C>T

Sequence
ggagccccgaagatgattcacctc[C/T]ggtctgcgatgggcccaagctgtc
ASB in cell types
MCF10A (breast epithelial cells)
ASB for transcription factors
P63_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P63_HUMAN 2.43 -0.22 1.0·10-50.85 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  body mass index (bmi),  obesity with early age of onset (age >2)
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Lung,  Nerve_Tibial,  Thyroid

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