rs6066520 chr20:47881943 A>G
- Sequence
ttagcaggtggacctgacctaatc[A/G]cactagctgtttgaatctgggcct
- ASB in cell types
- iPSC (induced pluripotent stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | 2.63 | -2.25 | 1.00 | -4.89 | Concordant |
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Motif analysis
Genetic associations
GRASP age at death with kuru exposure, hdl cholesterol, late onset alzheimers disease, rheumatoid arthritis, spine bone mineral density (bmd), years of education