rs6067910 chr20:51712706 G>C

Sequence
agctgggatgccagcacacaaaat[G/C]taattccaggtttatgacacataa
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) foreskin keratinocyte
ASB for transcription factors
SMRC1_HUMAN ZN600_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN 2.51 -2.49 4.2·10-41.00 1.00 n/a n/a
ZN600_HUMAN 1.93 n/a 4.5·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) ldl cholesterol obesity with early age of onset (age >2)
GTEx eQTL Brain_Cerebellar_Hemisphere Brain_Cerebellum Esophagus_Mucosa Muscle_Skeletal

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