rs6068588 chr20:53580827 C>A
- Sequence
ccaaacggctgcccaaataatatt[C/A]ctggctctagttgatcatcactcc
- ASB in cell types
- 22RV1 (prostate carcinoma)
- ASB for transcription factors
- NFXL1_HUMAN CTCF_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFXL1_HUMAN | -4.87 | 2.46 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.86 | 1.13 | 1.12 | n/a | No Hit | |||
| ANDR_HUMAN | 2.79 | 0.87 | 2.67 | n/a | No Hit |
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