rs6068599 chr20:53643079 T>C
- Sequence
tagacaagggaagaaaaacctcat[T/C]tctttgatgatttttttaaagagc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- NFXL1_HUMAN ETV6_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFXL1_HUMAN | n/a | 3.82 | 2.00 | n/a | n/a | |||
| ETV6_HUMAN | n/a | 3.27 | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.11 | -1.76 | 1.17 | n/a | No Hit |
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