rs6068642 chr20:53740228 A>C
- Sequence
taaagccactggggatttagaaca[A/C]agtgtgtccttggaaagaagtggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- NFXL1_HUMAN IKZF2_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFXL1_HUMAN | 3.05 | n/a | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.42 | -1.31 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 1.40 | -0.19 | 1.00 | n/a | n/a |
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