rs6068647 chr20:53751137 T>C
- Sequence
ccacacacacacagactcacacct[T/C]ggagaggagctgcatgctgttata
- ASB in cell types
- 22RV1 (prostate carcinoma) CAR-T cells breast tumor MV-4-11 (Childhood acute monocytic leukemia)
- ASB for transcription factors
- HTF4_HUMAN SMCA5_HUMAN NFXL1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | n/a | 3.32 | 3.00 | n/a | No Hit | |||
| SMCA5_HUMAN | -3.97 | 2.32 | 1.50 | n/a | No Hit | |||
| NFXL1_HUMAN | 2.17 | n/a | 3.00 | n/a | n/a |
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