rs6068709 chr20:53893870 T>A

Sequence
tagtacgaataggtagtttttcca[T/A]cctctccccaccccaccctccacc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CTBP1_HUMAN ZN687_HUMAN NFXL1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTBP1_HUMAN n/a 3.27 1.000.03 4.00 n/a n/a
ZN687_HUMAN -1.95 2.39 1.000.03 1.00 n/a n/a
NFXL1_HUMAN -1.80 2.59 1.000.04 2.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

Download