rs6069016 chr20:54864336 G>C
- Sequence
ctaagaactatattccagaaaact[G/C]ctggatctattctgttatatgtac
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | n/a | 2.62 | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, chronic kidney disease, college completion, mitral annular calcium, rheumatoid arthritis, serum creatinine