rs6072420 chr20:41554310 G>C
- Sequence
tagcactggaataaaaacaagcag[G/C]gcacctaacactgccaggaatgtg
- ASB for transcription factors
- CLOCK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CLOCK_HUMAN | 2.06 | -1.57 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, birth weight, college completion, diastolic blood pressure (dbp), hdl cholesterol, paternal transmission distortion, systolic blood pressure (sbp), transmission distortion, years of education
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Spleen, Thyroid