rs6072445 chr20:41609549 T>C
- Sequence
actatatagcattaactcatgcca[T/C]aaacaaaacagacactgctgcatt
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.01 | 1.89 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, birth weight, college completion, diastolic blood pressure (dbp), ldl cholesterol, systolic blood pressure (sbp), total cholesterol, years of education
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Spleen, Thyroid