rs60759175 chr3:27060608 A>T
- Sequence
tgtggttgattttatctacttttt[A/T]aagtaaacaaaaaggtgaaccaat
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN TBP_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.76 | 0.88 | 1.96 | -0.14 | Weak Concordant | |||
| ANDR_HUMAN | 2.04 | 0.01 | 1.71 | n/a | No Hit | |||
| TBP_HUMAN | 2.04 | -1.95 | 1.50 | -4.77 | Concordant |
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Motif analysis
