rs6077556 chr20:9503151 T>C
- Sequence
ggggagataattaggtttagatga[T/C]gtcacaagggtggggccatgtgag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | n/a | 2.99 | 3.75 | 8.41 | Concordant |
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Motif analysis
Genetic associations
GRASP arthritis including non-rheumatoid, paternal transmission distortion, refractive error, sporadic creutzfeldt-jakob disease