rs6077611 chr20:9913043 G>T
- Sequence
ttgtgagcgagtgctccacctgtc[G/T]gccactgctgacattacaccataa
- ASB in cell types
- erythroid progenitors HT1080 (fibrosarcoma) WA09 (embryonic stem cells) esophagus muscularis mucosa
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.98 | 0.75 | 1.37 | -5.15 | Concordant |
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Motif analysis
