ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs6081337
chr20:1945216
T
>
C
Sequence
tgatcctgggttcagggcaatcac[T/C]tttttaaaaaaatgacgcatgatc
ASB in cell types
liver
monocytes from periferal blood
CD14+ monocytes
ASB for transcription factors
HNF4A_HUMAN
SRBP2_HUMAN
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN
2.72
-2.39
1.1·10
-3
1.00
1.00
n/a
No Hit
SRBP2_HUMAN
2.05
-0.87
0.02
1.00
3.00
n/a
No Hit
STAT1_HUMAN
1.93
0.06
0.02
1.00
3.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
triglycerides
GTEx eQTL
Lung
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)