rs6082849 chr20:2352041 G>A
- Sequence
cctagttactacagccagcctcca[G/A]aatttaacaactagtcaacgccag
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) GM10847 (female B-cells Lymphoblastoid Cell Lines) monocytes from periferal blood GM23338
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN SRBP2_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.89 | -0.07 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.77 | 0.27 | 1.45 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.48 | n/a | 3.00 | n/a | No Hit |
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