rs6083616 chr20:24772891 A>G

Sequence
acacagacaaccagaggacatgcc[A/G]tgctgagagaagaaagggcaggtg
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.42 2.66 1.004.6·10-3 2.00 5.25 Concordant
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Motif analysis

GCR_HUMAN Concordant
GCR_HUMAN pic

Genetic associations

GRASP body mass index (bmi) total cholesterol total cholesterol change with statins triglycerides change with statins
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Thyroid Whole_Blood

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