rs6083954 chr20:2652330 T>A
- Sequence
cagctctgctgcccgtaactcata[T/A]gacaagaacatcaggaaccggact
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TYY1_HUMAN FOXK2_HUMAN TBP_HUMAN MYCN_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TYY1_HUMAN | 1.32 | 1.71 | 1.67 | n/a | No Hit | |||
| FOXK2_HUMAN | 2.70 | -4.54 | 1.50 | n/a | n/a | |||
| TBP_HUMAN | 0.13 | 1.21 | 1.00 | n/a | No Hit | |||
| MYCN_HUMAN | -0.06 | 1.78 | 1.00 | n/a | No Hit |
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