rs6089293 chr20:61423102 T>C

Sequence
gctgtggccctgctgcacgtggtg[T/C]acctcggggcagggcagagagctg
ASB for transcription factors
CTCF_HUMAN
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Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.95 -0.83 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  fasting insulin,  homa-b,  homa-ir,  obesity with early age of onset (age >2),  serum creatinine,  suicide attempts in bipolar disorder,  suicide attempts in bipolar disorder (males),  total cholesterol
GTEx eQTL Brain_Spinal_cord_cervical_c-1,  Heart_Atrial_Appendage

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