rs6092580 chr20:57991423 A>T
- Sequence
ctgggagccagcacacattttttt[A/T]gttaaggagctgagcgagtcatta
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- PAX2_HUMAN PKNX1_HUMAN CLOCK_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PAX2_HUMAN | 2.50 | n/a | 3.00 | n/a | n/a | |||
| PKNX1_HUMAN | 2.74 | n/a | 3.00 | n/a | No Hit | |||
| CLOCK_HUMAN | 2.92 | n/a | 3.00 | n/a | No Hit |
Items per page:
1 – 3 of 3