rs6095135 chr20:48460986 C>T

Sequence
tcatgactttcgaaatagctgcat[C/T]tcatctatattctgatctagtcaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GATA3_HUMAN PKNX1_HUMAN CREB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA3_HUMAN 0.64 1.30 0.606.0·10-5 3.57 n/a No Hit
PKNX1_HUMAN n/a 1.34 1.005.5·10-3 6.00 n/a No Hit
CREB1_HUMAN n/a 1.30 1.000.02 6.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels aortic valve calcium chronic kidney disease hdl cholesterol ldl cholesterol total cholesterol

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