rs6095323 chr20:48832634 T>C

Sequence
ttggaattagagcagctggacaac[T/C]caaatcaacgctggacacacagcc
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.41 -5.07 2.3·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder,  birth weight,  body mass index (bmi),  height,  infant head circumference
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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