rs6097680 chr20:53943967 T>A
- Sequence
caacttcctttattttttatttat[T/A]ttttttttttaagttgtaatcttt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MS-1 (Small cell lung carcinoma) GM10847 (female B-cells Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.01 | 0.24 | 1.04 | n/a | n/a | |||
| CTCF_HUMAN | 1.43 | 0.57 | 1.35 | n/a | No Hit |
Items per page:
1 – 2 of 2