rs6097867 chr20:54251904 A>T
- Sequence
tgccccatattttagaaacaggga[A/T]actggagcatagataggttaagtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN SIX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | n/a | 3.05 | 4.00 | n/a | No Hit | |||
| FOXA1_HUMAN | n/a | 2.52 | 3.00 | n/a | No Hit | |||
| SIX4_HUMAN | n/a | 3.23 | 6.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, docetaxel response in lymphoblastoid cell lines, urinary albumin-to-creatinine ratio