rs6099621 chr20:57435910 A>G
- Sequence
agcctgtggttctggaatgcgggc[A/G]agccaccgtccccagagacctgtg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- HCFC1_HUMAN NFIB_HUMAN RFX5_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HCFC1_HUMAN | n/a | 3.21 | 3.00 | n/a | n/a | |||
| NFIB_HUMAN | n/a | 2.20 | 3.50 | n/a | n/a | |||
| RFX5_HUMAN | n/a | 3.18 | 4.00 | n/a | No Hit | |||
| CREB1_HUMAN | 0.83 | 2.16 | 3.00 | n/a | No Hit | |||
| PKNX1_HUMAN | n/a | 1.96 | 3.00 | n/a | No Hit |
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