rs6099719 chr20:57692204 C>T

Sequence
cgatgccccctgtgtagtgggtgc[C/T]tattacaatccccattttacagat
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.28 -5.22 3.7·10-51.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  hypertension (early onset hypertension)
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Artery_Tibial,  Colon_Sigmoid,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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