rs6101749 chr20:39881223 C>T
- Sequence
ttaacttggctgggagcggtggct[C/T]gtgcctgtaatcccagcactttgg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM18505 (female B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.18 | 1.62 | 1.52 | n/a | No Hit | |||
| STAG1_HUMAN | 0.34 | 1.81 | 1.57 | n/a | n/a |
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