rs6103533 chr20:43955758 G>T

Sequence
tctagccatcagtataaatttcta[G/T]ttttgaatcactgccacgctgttt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.12 0.11 0.030.97 1.10 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid ldl cholesterol
GTEx eQTL Nerve_Tibial

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