rs6103862 chr20:44785988 T>A
- Sequence
taccccagagagcccttccagctg[T/A]gacattccacacagctcattcaga
- ASB in cell types
- BEAS-2B (bronchial epithelium) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN NFIB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.13 | 1.98 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.54 | 0.97 | 1.49 | n/a | No Hit | |||
| NFIB_HUMAN | -1.45 | 1.50 | 1.25 | n/a | n/a |
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