rs61081633 chr1:183026473 A>G
- Sequence
ttcgatcaacaatttatgacaagt[A/G]ggcaaggtgtcatgtgtcactgtg
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN577_HUMAN OSR2_HUMAN ZBT11_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN577_HUMAN | 3.11 | n/a | 2.00 | n/a | n/a | |||
| OSR2_HUMAN | 1.70 | n/a | 2.00 | n/a | No Hit | |||
| ZBT11_HUMAN | 2.88 | -5.39 | 2.00 | n/a | n/a | |||
| ZBT17_HUMAN | 1.98 | n/a | 2.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.53 | -0.21 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood