rs6111041 chr20:1702398 T>G
- Sequence
gtttcccatgtagatgacttggtt[T/G]aaaaaacattcatttgcatacaca
- ASB in cell types
- monocyte-derived macrophages from peripheral blood macrophages form periferal blood MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.03 | -0.19 | 1.82 | n/a | No Hit | |||
| CDK9_HUMAN | -0.22 | 1.61 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP college completion, fasting insulin, hdl cholesterol, homa-b, homa-ir, mitral annular calcium, years of education