rs6111733 chr20:17904228 G>A
- Sequence
tgcagaatgaaaccacagtaagat[G/A]ctacctcacactcacaagcatggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN NFAC3_HUMAN ZN143_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | -3.38 | 3.23 | 1.00 | n/a | No Hit | |||
| NFAC3_HUMAN | -3.31 | 3.17 | 1.00 | n/a | No Hit | |||
| ZN143_HUMAN | -2.52 | 2.84 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.86 | 1.73 | 1.50 | n/a | n/a | |||
| STAG1_HUMAN | 0.12 | 1.42 | 1.10 | n/a | n/a |
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