rs6113491 chr20:22076777 A>C

Sequence
aaaggaaaacctgtacccattaag[A/C]aattgctccctatttctcccacct
ASB in cell types
MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN -2.45 2.39 1.000.02 1.00 1.88 Weak Concordant
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Motif analysis

CEBPB_HUMAN Weak Concordant
CEBPB_HUMAN pic

Genetic associations

EMBL-EBI male-pattern baldness
GRASP androgenetic alopecia,  androgenetic alopecia early age of onset,  aortic valve calcium,  hip bone mineral density (bmd),  ldl cholesterol change with statins,  total cholesterol change with statins
GTEx eQTL Esophagus_Mucosa,  Testis

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