rs6114277 chr20:23776628 A>G
- Sequence
cctcctgtttcctcagaaaaggga[A/G]aagtgcagggccctcctgggatct
- ASB in cell types
- NALM-6 (adult B acute lymphoblastic leukemia) ICN12 (primary pre-B acute lymphomablastic leukemia)
- ASB for transcription factors
- IKZF1_HUMAN COE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.22 | 2.48 | 1.00 | n/a | No Hit | |||
| COE1_HUMAN | -3.08 | 2.96 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Esophagus_Muscularis, Lung, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Stomach, Testis, Thyroid