ADASTRA v5.1.3
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rs6114689
chr20:24402463
C
>
A
Sequence
gcaggtttgctttggcacaggaac[C/A]aagccatggatgggagcagatgcc
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
FOXA1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
-0.11
1.78
1.00
3.3·10
-8
1.56
n/a
No Hit
FOXA1_HUMAN
0.05
2.56
1.00
7.2·10
-8
1.60
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
bipolar disorder
,
college completion
,
fasting insulin
,
homa-ir
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)