rs6116931 chr20:645645 G>A
- Sequence
gtagctcttgcaggccagagggac[G/A]gccctgccgcgggggccggagagc
- ASB in cell types
- HepG2 (hepatoblastoma) WA09 (embryonic stem cells) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) CD14+ monocytes
- ASB for transcription factors
- JUN_HUMAN STAT1_HUMAN XRCC5_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.07 | 1.18 | 1.62 | n/a | No Hit | |||
| STAT1_HUMAN | 2.37 | n/a | 3.00 | n/a | No Hit | |||
| XRCC5_HUMAN | 1.49 | -0.35 | 1.33 | n/a | n/a |
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