rs6117337 chr20:728679 C>T

Sequence
gtgaagtgctgagaacagggcaag[C/T]gggccgtacctttaaatgccctgt
ASB in cell types
foreskin keratinocyte GM02610 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.74 0.96 1.007.6·10-3 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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