rs61174940 chr1:6486627 G>A
- Sequence
cagcccaggtccctgcagttctag[G/A]ccaggtccccaccgccagggggca
- ASB in cell types
- K562 (myelogenous leukemia) epidermal keratinocytes
- ASB for transcription factors
- JUN_HUMAN ILF3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.16 | -0.18 | 2.25 | n/a | No Hit | |||
| ILF3_HUMAN | -1.09 | 1.68 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Skin_Sun_Exposed_Lower_leg