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rs61192710 chr17:68813456 C>T

Sequence
gttgctcagctctggagtgtgcct[C/T]tagttctctgttttagaaatattg
ASB in cell types
SK-UT-1 (Uterine corpus leiomyosarcoma) CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
HDAC4_HUMAN FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HDAC4_HUMAN n/a 2.59 1.008.1·10-3 1.00 n/a n/a
FOXA2_HUMAN -0.32 1.82 1.000.02 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg

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