rs6119636 chr20:35665096 G>C

Sequence
accgaccttgggctagtggccctg[G/C]cgggtgggctgggtatgagtgtct
ASB in cell types
pancreas adrenal gland CD14+ monocytes
ASB for transcription factors
CTCF_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.24 0.85 0.040.98 1.15 n/a No Hit
STAT1_HUMAN 2.24 n/a 0.041.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin hdl cholesterol height homa-ir microalbuminuria plasma protein-c levels triglycerides
GTEx eQTL Artery_Aorta Brain_Cortex Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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