rs6121559 chr20:62387063 T>G
- Sequence
cccggaagcgctcgccgaggcccc[T/G]ccttgcccgccgatatctctgccg
- ASB in cell types
- HepG2 (hepatoblastoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- GABPA_HUMAN TYY1_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.93 | 0.31 | 1.44 | n/a | No Hit | |||
| TYY1_HUMAN | 3.42 | -0.01 | 1.50 | n/a | No Hit | |||
| CREB1_HUMAN | 0.85 | 0.14 | 1.29 | n/a | No Hit |
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