rs6122428 chr20:62704657 A>G
- Sequence
ggttcttccctgagaacacagctc[A/G]tgtttccagaaagctggccaaggt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- PKNX1_HUMAN NFIB_HUMAN CTBP1_HUMAN ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | 2.47 | n/a | 2.00 | n/a | No Hit | |||
| NFIB_HUMAN | 1.37 | n/a | 2.50 | n/a | n/a | |||
| CTBP1_HUMAN | 2.11 | n/a | 2.00 | n/a | n/a | |||
| ELF1_HUMAN | 1.43 | -0.43 | 1.67 | n/a | No Hit |
Items per page:
1 – 4 of 4