rs6122543 chr20:46971321 A>T

Sequence
catcagcagcccagattcctttca[A/T]cttgtttcctcatccttaaggtgc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CREB1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN 1.04 -0.91 2.9·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol multiple sclerosis (progressive multiple sclerosis) rheumatoid arthritis transmission distortion triglycerides
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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