rs6122895 chr20:50283557 G>A

Sequence
cagtgtgggccagggcctggacgt[G/A]tgggcagcaagagggtgggtgagg
ASB in cell types
breast tumor
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
breast tumor 2.26 n/a 0.031.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  ldl cholesterol,  serum creatinine,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Heart_Atrial_Appendage,  Lung,  Spleen,  Thyroid,  Whole_Blood

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