rs6123666 chr20:57148152 C>A

Sequence
tgtggagaagcaccaaccgaataa[C/A]agggcatctcctgatgccatcctt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
NFIB_HUMAN SP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIB_HUMAN n/a 3.83 1.001.6·10-4 3.00 n/a n/a
SP1_HUMAN n/a 3.21 1.000.03 4.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Nerve_Tibial Skin_Sun_Exposed_Lower_leg Testis

Download