rs6125847 chr20:49979157 G>C
- Sequence
gcgacgattgcagggaggcgcctt[G/C]gccagcagagggcgccagaggacc
- ASB in cell types
- glioblastoma cells THP-1 (acute monocytic leukemia) Ishikawa (endometrial adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| glioblastoma cells | 0.53 | n/a | 2.00 | |||
| THP-1 (acute monocytic leukemia) | 0.69 | 0.92 | 1.00 | |||
| Ishikawa (endometrial adenocarcinoma) | 1.06 | -0.02 | 1.28 |
Items per page:
1 – 3 of 3