rs6127941 chr20:57106928 G>C
- Sequence
tctgatctgaaagacgatcttccc[G/C]tatttcccccacagctcagggagg
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) THP-1 (acute monocytic leukemia) TALL1 (T-Acute Lymphoblastic Leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- SPI1_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.10 | 1.93 | 1.63 | 1.79 | Weak Concordant | |||
| SMCA4_HUMAN | -3.97 | 2.08 | 1.50 | n/a | n/a |
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Motif analysis
